dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00065
Location and strand information: 51288 - 53561 (+)
Family: 1.B.42.1.4
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00066
Location and strand information: 53575 - 54774 (+)
Family: null
Protein type: null
Protein description: Chaperone SurA

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00067
Location and strand information: 54774 - 55604 (+)
Family: null
Protein type: null
Protein description: Ribosomal RNA small subunit methyltransferase A

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00068
Location and strand information: 55684 - 57606 (+)
Family: 2.A.37.1.5
Protein type: TC
Protein description: Glutathione-regulated potassium-efflux system protein KefB

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00069
Location and strand information: 57634 - 58881 (-)
Family: null
Protein type: null
Protein description: FeS cluster assembly protein SufD

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00070
Location and strand information: 58882 - 59640 (-)
Family: 3.A.1.128.6
Protein type: TC
Protein description: putative ATP-dependent transporter SufC

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00071
Location and strand information: 59652 - 61094 (-)
Family: null
Protein type: null
Protein description: FeS cluster assembly protein SufB

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00072
Location and strand information: 61229 - 62227 (+)
Family: PAS+GGDEF
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00073
Location and strand information: 62227 - 63138 (+)
Family: 1.A.34.1.2
Protein type: TC
Protein description: Murein hydrolase activator NlpD

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00074
Location and strand information: 63235 - 63600 (+)
Family: null
Protein type: null
Protein description: Sec translocon accessory complex subunit YajC

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00075
Location and strand information: 63613 - 65163 (+)
Family: 2.A.6.4.1
Protein type: TC
Protein description: Protein translocase subunit SecD

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00076
Location and strand information: 65183 - 66121 (+)
Family: 2.A.6.4.1
Protein type: TC
Protein description: Protein translocase subunit SecF

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00077
Location and strand information: 66447 - 67085 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00078
Location and strand information: 67088 - 67354 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00079
Location and strand information: 67816 - 70284 (-)
Family: GT35
Protein type: CAZyme
Protein description: Maltodextrin phosphorylase
Protein isoelectric point: 6.1952
Protein molecular weight: 94939.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00080
Location and strand information: 70465 - 71820 (+)
Family: 1.B.17.1.5
Protein type: TC
Protein description: Outer membrane efflux protein BepC

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00081
Location and strand information: 71896 - 72255 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00082
Location and strand information: 72326 - 74965 (+)
Family: null
Protein type: null
Protein description: Valine--tRNA ligase

Gene clsuter ID: MGYG000000506_1|CGC1
Gene ID: MGYG000000506_00083
Location and strand information: 74976 - 75614 (+)
Family: 9.B.186.1.1
Protein type: TC
Protein description: putative lipoprotein YiaD

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000506_00065	LPS-assembly protein LptD	TC	51288	53561	+	1.B.42.1.4
MGYG000000506_00066	Chaperone SurA	null	53575	54774	+	SurA_N_3\| Rotamase
MGYG000000506_00067	Ribosomal RNA small subunit methyltransferase A	null	54774	55604	+	RrnaAD
MGYG000000506_00068	Glutathione-regulated potassium-efflux system protein KefB	TC	55684	57606	+	2.A.37.1.5
MGYG000000506_00069	FeS cluster assembly protein SufD	null	57634	58881	-	SufBD_N\| SUFBD
MGYG000000506_00070	putative ATP-dependent transporter SufC	TC	58882	59640	-	3.A.1.128.6
MGYG000000506_00071	FeS cluster assembly protein SufB	null	59652	61094	-	SufBD_N\| SUFBD
MGYG000000506_00072	hypothetical protein	STP	61229	62227	+	PAS\| GGDEF
MGYG000000506_00073	Murein hydrolase activator NlpD	TC	62227	63138	+	1.A.34.1.2
MGYG000000506_00074	Sec translocon accessory complex subunit YajC	null	63235	63600	+	YajC
MGYG000000506_00075	Protein translocase subunit SecD	TC	63613	65163	+	2.A.6.4.1
MGYG000000506_00076	Protein translocase subunit SecF	TC	65183	66121	+	2.A.6.4.1
MGYG000000506_00077	hypothetical protein	null	66447	67085	+	No domain
MGYG000000506_00078	hypothetical protein	null	67088	67354	+	No domain
MGYG000000506_00079	Maltodextrin phosphorylase	CAZyme	67816	70284	-	GT35
MGYG000000506_00080	Outer membrane efflux protein BepC	TC	70465	71820	+	1.B.17.1.5
MGYG000000506_00081	hypothetical protein	null	71896	72255	+	No domain
MGYG000000506_00082	Valine--tRNA ligase	null	72326	74965	+	tRNA-synt_1\| Anticodon_1\| Val_tRNA-synt_C
MGYG000000506_00083	putative lipoprotein YiaD	TC	74976	75614	+	9.B.186.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature